Package 'splinetimer' Title Time-course Differential Gene Expression Data Analysis Using Spline Regression Models Followed by Gene Association Network Reconstruction
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December 22, 2016 Type Package Title Time-course differential gene expression data analysis using spline regression models followed by gene association network reconstruction Version 1.2.0 Date 2016-10-05 Author Agata Michna Maintainer Herbert Braselmann Depends R (>= 3.3), Biobase, igraph, limma, GSEABase, gtools, splines, GeneNet (>= 1.2.13), longitudinal (>= 1.1.12), FIs Description This package provides functions for differential gene expression analysis of gene expression time-course data. Natural cubic spline regression models are used. Identified genes may further be used for pathway enrichment analysis and/or the reconstruction of time dependent gene regulatory association networks. License GPL-3 biocViews GeneExpression, DifferentialExpression, TimeCourse, Regression, GeneSetEnrichment, NetworkEnrichment, NetworkInference, GraphAndNetwork VignetteBuilder knitr Suggests knitr NeedsCompilation no
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Package ‘ splineTimeR ’
March 23, 2017 Type Package Title Time-course differential gene expression data analysis using spline regression models followed by gene association network reconstruction Version 1.2.0 Date 2016-10-05 Author Agata Michna Maintainer Herbert Braselmann Depends R (>= 3.3), Biobase, igraph, limma, GSEABase, gtools, splines, GeneNet (>= 1.2.13), longitudinal (>= 1.1....
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تاریخ انتشار 2016